WFGY/ProblemMap/GlobalFixMap/RAG/index_skew.md

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Index Skew — Guardrails and Fix Pattern

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When the index reports "healthy" (no errors, embeddings ingested, stats normal) but retrieval still fails:
coverage is low, ΔS unstable, or retrieved snippets are inconsistent with ground truth.
This indicates an index skew between data reality and retrieval semantics.


Open these first


Core acceptance

  • ΔS(question, retrieved) ≤ 0.45
  • Coverage ≥ 0.70 for target section
  • λ stable across three paraphrases and two seeds
  • E_resonance flat across long windows

Typical symptoms → exact fix

Symptom Likely cause Open this
Index "ready" but recall < 0.50 embedding misaligned vs semantic intent Embedding ≠ Semantic
Repeated snippets, poor coverage store fragmentation or duplicate collapse Vectorstore Fragmentation
Right section exists but not hit chunk too large/small or mis-boundary Chunking Checklist
Citations drift across runs contract not enforced Data Contracts

Fix in 60 seconds

  1. Probe recall
    Run a gold QA set against index. If coverage < 0.70, suspect skew.

  2. Re-embed with semantic normalization
    Normalize casing, accents, whitespace. Enforce same tokenizer across queries and index.

  3. Chunk audit
    Verify chunk boundaries. Adjust stride/overlap until ΔS converges.

  4. Fragmentation sweep
    Drop near-duplicate vectors. Rebuild FAISS/HNSW indexes with fresh IDs.

  5. Contract enforcement
    Require snippet_id, section_id, offsets, tokens for every retrieval.


Copy-paste probe prompt

I uploaded TXT OS and the WFGY Problem Map.

My RAG issue:
- Index shows healthy but retrieval recall is low.
- ΔS across probes = 0.62, coverage = 0.45.

Tell me:
1) is it embedding misalignment, chunking skew, or vectorstore fragmentation,
2) which WFGY fix page to open,
3) minimal steps to restore ΔS ≤ 0.45 and coverage ≥ 0.70,
4) reproducible test set to confirm.

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