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ruvector/Cargo.toml
rUv eafba64fa5
fix(security): RUSTSEC advisories + clippy hardening in RuVector (#504) 
* fix(security): RUSTSEC advisories + clippy hardening in RuVector

- Replace all bare `partial_cmp().unwrap()` calls on f32/f64 with
  `.unwrap_or(Ordering::Equal)` to prevent panics on NaN values in
  sorting/max-by operations across ruvllm, ruvector-dag, prime-radiant,
  and rvagent-wasm (12 sites in production code).
- Add input validation guards to the HTTP search endpoint: reject k=0,
  k > 10_000, empty vectors, and vectors exceeding 65_536 dimensions,
  preventing memory exhaustion via unbounded allocations.
- Harden LocalFsBackend::execute in rvagent-cli with env_clear() +
  safe-env allowlist (SEC-005), deadline-based timeout enforcement, and
  1 MB output truncation, matching the security posture of LocalShellBackend.
- Remove 129 occurrences of the deprecated `unused_unit = "allow"` lint
  and 3 occurrences of the removed `clippy::match_on_vec_items` lint from
  Cargo.toml files workspace-wide; both are no-ops in current Rust/Clippy.
- All 653+ tests across ruvector-core, ruvector-server, ruvector-dag,
  rvagent-cli, and prime-radiant pass with zero failures.

Note: `bytes` is already at 1.11.1 (>= 1.10.0); `paste` 1.0.15 is a
transitive dependency with no semver fix available upstream; `cargo audit`
returns clean.

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(ci): cargo fmt + restore workspace unused_unit lint allow

- Run cargo fmt --all across all 9 files that drifted from rustfmt style
  (prime-radiant/energy.rs, ruvector-dag/bottleneck.rs+reasoning_bank.rs,
   ruvector-server/points.rs, ruvllm/pretrain_pipeline.rs+report.rs+registry.rs,
   rvagent-cli/app.rs, rvagent-wasm/gallery.rs)
- Add [workspace.lints.clippy] unused_unit = "allow" to root Cargo.toml;
  the per-crate entries removed in the security commit were still needed —
  moving to workspace-level is cleaner and restores -D warnings CI pass

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(ci): remove unneeded unit return type in ruvix bench

Removes `-> ()` from the Fn bound in run_benchmark_with_kernel
(crates/ruvix/benches/src/ruvix.rs:50) — triggers clippy::unused_unit
under -D warnings. Clippy prefers `Fn(&mut Kernel)` without explicit
unit return.

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(ci): resolve rustfmt and clippy unused_unit failures

- Run cargo fmt --all to fix long closure formatting in 9 files
  (energy.rs, bottleneck.rs, reasoning_bank.rs, points.rs,
  pretrain_pipeline.rs, report.rs, registry.rs, app.rs, gallery.rs)
- Add unused_unit = "allow" to [lints.clippy] in ruvix-bench and
  ruvector-mincut Cargo.toml files to suppress the unused_unit lint
  that was previously suppressed globally and now fires on two
  Fn(&mut T) -> () and FnMut() -> () function bounds

Co-Authored-By: claude-flow <ruv@ruv.net>
2026-05-23 05:40:24 -04:00

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[workspace]
exclude = ["crates/micro-hnsw-wasm", "crates/ruvector-hyperbolic-hnsw", "crates/ruvector-hyperbolic-hnsw-wasm", "examples/ruvLLM/esp32", "examples/ruvLLM/esp32-flash", "examples/edge-net", "examples/data", "examples/ruvLLM", "examples/delta-behavior", "crates/rvf", "crates/rvf/*", "crates/rvf/*/*", "examples/rvf-desktop", "crates/mcp-brain-server",
# ruvector-postgres is a pgrx-based PostgreSQL extension. Its build script
# requires `$PGRX_HOME` set up via `cargo install cargo-pgrx --version 0.12.9`
# and `cargo pgrx init`, which downloads and builds multiple Postgres
# versions. Keep it out of default workspace builds so `cargo build --workspace`
# works in stock environments. Build it explicitly with `cargo build -p ruvector-postgres`
# after running pgrx init.
"crates/ruvector-postgres",
# Iter 219 (closes ADR-178 Gap E folded into Gap B): the hailo
# crates rejoined the workspace once the iter-218 ruvector-core
# path dep + EmbeddingProvider impls landed. The `hailo` feature
# stays opt-in (only `cargo build --features hailo,cpu-fallback`
# pulls libhailort + candle), so workspace builds on stock x86
# still compile without Pi-specific tooling.
# ruos-thermal: Pi 5 thermal supervisor skeleton (ADR-174). Standalone
# for now; joins workspace once daemon mode + Unix socket protocol
# land in iters 92-97.
"crates/ruos-thermal"]
members = [
"crates/ruvector-acorn",
"crates/ruvector-acorn-wasm",
"crates/ruvector-rabitq",
"crates/ruvector-rabitq-wasm",
"crates/ruvector-rulake",
"crates/ruvector-core",
"crates/ruvector-node",
"crates/ruvector-wasm",
"crates/ruvector-cli",
"crates/ruvector-bench",
"crates/ruvector-metrics",
"crates/ruvector-filter",
"crates/ruvector-router-core",
"crates/ruvector-router-cli",
"crates/ruvector-router-ffi",
"crates/ruvector-router-wasm",
"crates/ruvector-server",
"crates/ruvector-snapshot",
"crates/ruvector-tiny-dancer-core",
"crates/ruvector-tiny-dancer-wasm",
"crates/ruvector-tiny-dancer-node",
"crates/ruvector-collections",
"crates/ruvector-cluster",
"crates/ruvector-raft",
"crates/ruvector-replication",
"crates/ruvector-graph",
"crates/ruvector-graph-node",
"crates/ruvector-graph-wasm",
"crates/ruvector-gnn",
"crates/ruvector-gnn-node",
"crates/ruvector-gnn-wasm",
"crates/ruvector-attention",
"crates/ruvector-attention-wasm",
"crates/ruvector-attention-node",
"crates/ruvector-cnn",
"crates/ruvector-cnn-wasm",
"crates/ruvector-mincut",
"crates/ruvector-mincut-wasm",
"crates/ruvector-mincut-node",
"crates/ruvector-mincut-gated-transformer",
"crates/ruvector-mincut-gated-transformer-wasm",
# NOTE: ruvector-postgres is in workspace `exclude` (pgrx env requirement).
"crates/ruvector-nervous-system",
# Iter 219 — hailo backend rejoined the workspace (closes
# ADR-178 Gap E folded into Gap B). All three build clean on
# x86 with default features; opting into the actual NPU path
# requires `--features hailo` on a Pi 5 + AI HAT+.
"crates/hailort-sys",
"crates/ruvector-hailo",
"crates/ruvector-mmwave",
"crates/ruvector-hailo-cluster",
"examples/refrag-pipeline",
"examples/scipix",
"examples/google-cloud",
"examples/subpolynomial-time",
"crates/sona",
"crates/rvlite",
"crates/ruvector-nervous-system",
"crates/ruvector-dag",
"crates/ruvector-dag-wasm",
"crates/ruvector-nervous-system-wasm",
"crates/ruvector-economy-wasm",
"crates/ruvector-learning-wasm",
"crates/ruvector-exotic-wasm",
"crates/ruvector-attention-unified-wasm",
"crates/ruvector-fpga-transformer",
"crates/ruvector-fpga-transformer-wasm",
"crates/ruvector-sparse-inference",
"crates/ruvector-math",
"crates/ruvector-math-wasm",
"examples/benchmarks",
"crates/cognitum-gate-kernel",
"crates/cognitum-gate-tilezero",
"crates/mcp-gate",
"crates/mcp-brain",
"crates/mcp-brain-server",
"crates/ruQu",
"crates/ruvllm",
"crates/ruvllm-cli",
"crates/ruvllm-wasm",
"crates/prime-radiant",
"crates/ruvector-delta-core",
"crates/ruvector-delta-wasm",
"crates/ruvector-delta-index",
"crates/ruvector-delta-graph",
"crates/ruvector-delta-consensus",
"crates/ruvector-crv",
"crates/ruvector-temporal-tensor",
"crates/ruqu-core",
"crates/ruqu-algorithms",
"crates/ruqu-wasm",
"crates/ruqu-exotic",
"crates/ruvector-domain-expansion",
"crates/ruvector-domain-expansion-wasm",
"crates/ruvector-solver",
"crates/ruvector-solver-wasm",
"crates/ruvector-solver-node",
"examples/dna",
"examples/OSpipe",
"crates/ruvector-coherence",
"crates/ruvector-profiler",
"crates/ruvector-attn-mincut",
"crates/ruvector-cognitive-container",
"crates/ruvector-verified",
"crates/ruvector-verified-wasm",
"crates/ruvector-graph-transformer",
"crates/ruvector-graph-transformer-wasm",
"crates/ruvector-graph-transformer-node",
"examples/rvf-kernel-optimized",
"examples/verified-applications",
"crates/thermorust",
"crates/ruvector-dither",
"crates/ruvector-robotics",
"examples/robotics",
"crates/neural-trader-core",
"crates/neural-trader-coherence",
"crates/neural-trader-replay",
"crates/neural-trader-wasm",
# Kalshi integration (ADR-153)
"crates/ruvector-kalshi",
"crates/neural-trader-strategies",
# RuVix Cognition Kernel (organized under crates/ruvix/)
"crates/ruvix/crates/types",
"crates/ruvix/crates/region",
"crates/ruvix/crates/queue",
"crates/ruvix/crates/cap",
"crates/ruvix/crates/proof",
"crates/ruvix/crates/sched",
"crates/ruvix/crates/boot",
"crates/ruvix/crates/vecgraph",
"crates/ruvix/crates/nucleus",
# Phase B: Bare metal AArch64 support
"crates/ruvix/crates/hal",
"crates/ruvix/crates/aarch64",
"crates/ruvix/crates/drivers",
"crates/ruvix/tests",
"crates/ruvix/benches",
"crates/ruvix/examples/cognitive_demo",
# rvAgent — AI Agent Framework (DeepAgents Rust conversion)
"crates/rvAgent/rvagent-core",
"crates/rvAgent/rvagent-backends",
"crates/rvAgent/rvagent-middleware",
"crates/rvAgent/rvagent-tools",
"crates/rvAgent/rvagent-subagents",
"crates/rvAgent/rvagent-cli",
"crates/rvAgent/rvagent-acp",
"crates/rvAgent/rvagent-mcp",
"crates/rvAgent/rvagent-wasm",
"crates/rvAgent/rvagent-a2a",
# ADR-159 a2a-swarm demo
"examples/a2a-swarm",
# ETL pipeline example
"examples/train-discoveries",
# Spectral graph sparsification
"crates/ruvector-sparsifier",
"crates/ruvector-sparsifier-wasm",
# Consciousness metrics (IIT Φ, causal emergence)
"crates/ruvector-consciousness",
"crates/ruvector-consciousness-wasm",
"examples/cmb-consciousness",
"examples/gw-consciousness",
"examples/ecosystem-consciousness",
"examples/quantum-consciousness",
"examples/gene-consciousness",
"examples/climate-consciousness",
# JS bundle decompiler (ADR-135)
"crates/ruvector-decompiler",
"crates/ruvector-decompiler-wasm",
# DiskANN / Vamana (ADR-143)
"crates/ruvector-diskann",
"crates/ruvector-diskann-node",
# Boundary-first scientific discovery PoC
"examples/boundary-discovery",
# CMB Cold Spot boundary-first discovery
"examples/cmb-boundary-discovery",
# FRB population boundary discovery (CHIME-like data)
"examples/frb-boundary-discovery",
# Cosmic void boundary information content
"examples/void-boundary-discovery",
# Multi-regime temporal attractor boundary detection
"examples/temporal-attractor-discovery",
# Music genre boundary discovery via spectral graph bisection
"examples/music-boundary-discovery",
# Weather regime boundary detection (variance/correlation precedes temperature)
"examples/weather-boundary-discovery",
# Market regime boundary discovery via correlation structure
"examples/market-boundary-discovery",
# Health state boundary detection from wearable sensor data
"examples/health-boundary-discovery",
# SETI exotic signals gallery: boundary-first detection of sub-threshold signals
"examples/seti-exotic-signals",
# SETI boundary-first discovery: sub-noise signal detection via coherence graphs
"examples/seti-boundary-discovery",
# Earthquake precursor detection via inter-station correlation boundary shifts
"examples/earthquake-boundary-discovery",
# Pandemic outbreak detection 60 days before case counts via correlation boundaries
"examples/pandemic-boundary-discovery",
# Infrastructure failure prediction via sensor correlation boundaries
"examples/infrastructure-boundary-discovery",
# Pre-seizure detection via brain correlation boundary shifts
"examples/brain-boundary-discovery",
# Clinical-publication-grade pre-seizure detection report with CSV output
"examples/seizure-clinical-report",
# Closed-loop seizure detection + therapeutic response simulation
"examples/seizure-therapeutic-sim",
# Real EEG analysis: CHB-MIT PhysioNet data with boundary-first detection
"examples/real-eeg-analysis",
# Multi-seizure cross-patient analysis: all 7 chb01 seizures
"examples/real-eeg-multi-seizure",
# ruvllm sparse attention kernel for Hailo-10H cluster (ADR-183 – ADR-190)
"crates/ruvllm_sparse_attention",
# Generic retrieval LM + masked discrete diffusion built on the kernel
"crates/ruvllm_retrieval_diffusion",
# RAIRS IVF: Redundant Assignment + Amplified Inverse Residual (ADR-193)
"crates/ruvector-rairs",
]
resolver = "2"
[workspace.lints.clippy]
unused_unit = "allow"
[workspace.package]
version = "2.2.3"
edition = "2021"
rust-version = "1.77"
license = "MIT"
authors = ["Ruvector Team"]
repository = "https://github.com/ruvnet/ruvector"
[workspace.dependencies]
# Core functionality
redb = "2.1"
memmap2 = "0.9"
hnsw_rs = "0.3"
simsimd = "5.9"
rayon = "1.10"
crossbeam = "0.8"
# Serialization
rkyv = "0.8"
bincode = { version = "2.0.0-rc.3", features = ["serde"] }
serde = { version = "1.0", features = ["derive"] }
serde_json = "1.0"
# Node.js bindings
napi = { version = "2.16", default-features = false, features = ["napi9", "async", "tokio_rt"] }
napi-derive = "2.16"
# WASM
wasm-bindgen = "0.2"
wasm-bindgen-futures = "0.4"
js-sys = "0.3"
web-sys = { version = "0.3", features = ["Worker", "MessagePort", "console"] }
getrandom = { version = "0.3", features = ["wasm_js"] }
# Async runtime
tokio = { version = "1.41", features = ["rt-multi-thread", "sync", "macros"] }
futures = "0.3"
# Error handling and utilities
thiserror = "2.0"
anyhow = "1.0"
tracing = "0.1"
tracing-subscriber = { version = "0.3", features = ["env-filter"] }
# Math and numerics
nalgebra = { version = "0.33", default-features = false, features = ["std"] }
ndarray = "0.16"
rand = "0.8"
rand_distr = "0.4"
# Time and UUID
chrono = { version = "0.4", features = ["serde"] }
uuid = { version = "1.11", features = ["v4", "serde", "js"] }
# CLI
clap = { version = "4.5", features = ["derive", "cargo"] }
indicatif = "0.17"
console = "0.15"
# Testing and benchmarking
criterion = { version = "0.5", features = ["html_reports"] }
proptest = "1.5"
mockall = "0.13"
# Formal verification
lean-agentic = "=0.1.0"
# Performance
dashmap = "6.1"
parking_lot = "0.12"
once_cell = "1.20"
[profile.release]
opt-level = 3
lto = "fat"
codegen-units = 1
strip = true
panic = "unwind"
[profile.bench]
inherits = "release"
debug = true
[profile.dev]
opt-level = 0
debug = true
[profile.test]
# Patch hnsw_rs to use rand 0.8 instead of 0.9 for WASM compatibility
# This resolves the getrandom version conflict (0.2 vs 0.3)
[patch.crates-io]
hnsw_rs = { path = "./patches/hnsw_rs" }
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