mirror of
https://github.com/ruvnet/RuVector.git
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d7efab34c5
ADR-015: Pure-JS biomarker engine mirroring Rust biomarker.rs and biomarker_stream.rs exactly. Includes: - src/biomarker.js: 20-SNP composite risk scoring, 6 gene-gene interactions, 64-dim L2-normalized profile vectors, synthetic population generation with Mulberry32 PRNG - src/stream.js: RingBuffer, StreamProcessor with Welford online stats, CUSUM changepoint detection, z-score anomaly detection, linear regression trend analysis, batch reading generation - tests/test-biomarker.js: 35 tests + 5 benchmarks covering all classification levels, risk scoring, vector encoding, population generation, streaming, anomaly/trend detection - index.d.ts: Full TypeScript definitions for all biomarker APIs - package.json: Bump to v0.3.0, add biomarker keywords Benchmark results (Node.js): computeRiskScores: 7.33 us/op encodeProfileVector: 9.51 us/op RingBuffer push+iter: 3.32 us/op https://claude.ai/code/session_014FpaYVohmyLH5dcBZTgmSY
65 lines
1.6 KiB
JSON
65 lines
1.6 KiB
JSON
{
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"name": "@ruvector/rvdna",
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"version": "0.3.0",
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"description": "rvDNA — AI-native genomic analysis. 20-SNP biomarker risk scoring, streaming anomaly detection, 64-dim profile vectors, 23andMe genotyping, CYP2D6/CYP2C19 pharmacogenomics, variant calling, protein prediction, and HNSW vector search.",
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"main": "index.js",
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"types": "index.d.ts",
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"author": "rUv <info@ruv.io> (https://ruv.io)",
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"homepage": "https://github.com/ruvnet/ruvector/tree/main/examples/dna",
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"repository": {
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"type": "git",
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"url": "https://github.com/ruvnet/ruvector.git",
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"directory": "npm/packages/rvdna"
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},
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"bugs": {
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"url": "https://github.com/ruvnet/ruvector/issues"
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},
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"license": "MIT",
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"engines": {
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"node": ">=18.0.0"
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},
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"files": [
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"index.js",
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"index.d.ts",
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"src/",
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"README.md"
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],
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"scripts": {
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"build:napi": "napi build --platform --release --cargo-cwd ../../../examples/dna",
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"test": "node tests/test-biomarker.js"
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},
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"devDependencies": {
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"@napi-rs/cli": "^2.18.0"
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},
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"optionalDependencies": {
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"@ruvector/rvdna-linux-x64-gnu": "0.1.0",
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"@ruvector/rvdna-linux-arm64-gnu": "0.1.0",
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"@ruvector/rvdna-darwin-x64": "0.1.0",
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"@ruvector/rvdna-darwin-arm64": "0.1.0",
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"@ruvector/rvdna-win32-x64-msvc": "0.1.0"
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},
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"publishConfig": {
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"access": "public"
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},
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"keywords": [
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"genomics",
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"bioinformatics",
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"dna",
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"rvdna",
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"biomarker",
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"health",
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"risk-score",
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"streaming",
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"anomaly-detection",
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"23andme",
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"pharmacogenomics",
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"variant-calling",
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"protein",
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"hnsw",
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"vector-search",
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"napi",
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"rust",
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"ai",
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"wasm"
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]
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}
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