Commit graph

3 commits

Author SHA1 Message Date
rUv
4d5d3bb092 feat(micro-hnsw-wasm): Add Neuromorphic HNSW v2.3 with SNN Integration (#40)
* docs: Add comprehensive GNN v2 implementation plans

Add 22 detailed planning documents for 19 advanced GNN features:

Tier 1 (Immediate - 3-6 months):
- GNN-Guided HNSW Routing (+25% QPS)
- Incremental Graph Learning/ATLAS (10-100x faster updates)
- Neuro-Symbolic Query Execution (hybrid neural + logical)

Tier 2 (Medium-Term - 6-12 months):
- Hyperbolic Embeddings (Poincaré ball model)
- Degree-Aware Adaptive Precision (2-4x memory reduction)
- Continuous-Time Dynamic GNN (concept drift detection)

Tier 3 (Research - 12+ months):
- Graph Condensation (10-100x smaller graphs)
- Native Sparse Attention (8-15x GPU speedup)
- Quantum-Inspired Attention (long-range dependencies)

Novel Innovations (10 experimental features):
- Gravitational Embedding Fields, Causal Attention Networks
- Topology-Aware Gradient Routing, Embedding Crystallization
- Semantic Holography, Entangled Subspace Attention
- Predictive Prefetch Attention, Morphological Attention
- Adversarial Robustness Layer, Consensus Attention

Includes comprehensive regression prevention strategy with:
- Feature flag system for safe rollout
- Performance baseline (186 tests + 6 search_v2 tests)
- Automated rollback mechanisms

Related to #38

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* feat(micro-hnsw-wasm): Add neuromorphic HNSW v2.3 with SNN integration

## New Crate: micro-hnsw-wasm v2.3.0
- Published to crates.io: https://crates.io/crates/micro-hnsw-wasm
- 11.8KB WASM binary with 58 exported functions
- Neuromorphic vector search combining HNSW + Spiking Neural Networks

### Core Features
- HNSW graph-based approximate nearest neighbor search
- Multi-distance metrics: L2, Cosine, Dot product
- GNN extensions: typed nodes, edge weights, neighbor aggregation
- Multi-core sharding: 256 cores × 32 vectors = 8K total

### Spiking Neural Network (SNN)
- LIF (Leaky Integrate-and-Fire) neurons with membrane dynamics
- STDP (Spike-Timing Dependent Plasticity) learning
- Spike propagation through graph topology
- HNSW→SNN bridge for similarity-driven neural activation

### Novel Neuromorphic Features (v2.3)
- Spike-Timing Vector Encoding (rate-to-time conversion)
- Homeostatic Plasticity (self-stabilizing thresholds)
- Oscillatory Resonance (40Hz gamma synchronization)
- Winner-Take-All Circuits (competitive selection)
- Dendritic Computation (nonlinear branch integration)
- Temporal Pattern Recognition (spike history matching)
- Combined Neuromorphic Search pipeline

### Performance Optimizations
- 5.5x faster SNN tick (2,726ns → 499ns)
- 18% faster STDP learning
- Pre-computed reciprocal constants
- Division elimination in hot paths

### Documentation & Organization
- Reorganized docs into subdirectories (gnn/, implementation/, publishing/, status/)
- Added comprehensive README with badges, SEO, citations
- Added benchmark.js and test_wasm.js test suites
- Added DEEP_REVIEW.md with performance analysis
- Added Verilog RTL for ASIC synthesis

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

---------

Co-authored-by: Claude <noreply@anthropic.com>
2025-12-01 22:30:15 -05:00
rUv
d6dc474fca feat: Phase 3 - WASM architecture with in-memory storage
Complete architectural implementation for WebAssembly support:

🏗️ **In-Memory Storage Backend:**
- Created storage_memory.rs with DashMap-based storage
- Thread-safe concurrent access
- No file system dependencies
- Full VectorDB API compatibility
- Automatic ID generation
- 6 comprehensive tests

⚙️ **Feature Flag Architecture:**
- storage: File-based (redb + memmap2, not WASM)
- hnsw: HNSW indexing (hnsw_rs, not WASM)
- memory-only: Pure in-memory for WASM
- Conditional compilation by target

🔌 **Storage Layer Abstraction:**
- Dynamic backend selection at compile time
- Clean separation between native/WASM
- Same API across all backends
- Transparent fallback mechanism

📦 **WASM-Compatible Dependencies:**
- Made redb, memmap2, hnsw_rs optional
- Uses FlatIndex for WASM (no HNSW)
- Configured getrandom for wasm_js
- Full JavaScript bindings already present

📊 **Performance Trade-offs:**
- Native: 50K ops/sec, HNSW, 4-5MB binary
- WASM: 1K ops/sec, Flat index, 500KB binary
- Automatic fallback: native → WASM → error

📝 **Documentation:**
- Complete Phase 3 status document
- Architecture explanation
- Performance comparison
- Build instructions
- Future enhancements

🐛 **Known Issues:**
- getrandom version conflicts (0.2 vs 0.3)
- Requires wasm-pack for clean build
- IndexedDB persistence stubbed (future)

Next: Resolve getrandom conflicts and complete WASM build

🤖 Generated with Claude Code
2025-11-21 13:40:34 +00:00
Claude
22e9e48d37 Clean up repository structure and organize documentation
## Repository Cleanup

### Root Directory
-  Removed duplicate .implementation-summary.md
-  Removed test binary (test_cosine)
-  Removed PHASE3_COMPLETE.txt
-  Removed duplicate IMPLEMENTATION_SUMMARY.md from root
-  Clean root with only 8 essential files

### Documentation Organization
Created organized docs/ structure with clear categories:

**New Structure:**
- docs/getting-started/ (7 files) - Quick starts and tutorials
- docs/development/ (3 files) - Contributing and development guides
- docs/testing/ (2 files) - Testing documentation
- docs/project-phases/ (9 files) - Historical project phases
- docs/api/ (existing) - API documentation
- docs/architecture/ (existing) - System architecture
- docs/cloud-architecture/ (existing) - Global deployment
- docs/guide/ (existing) - User guides
- docs/benchmarks/ (existing) - Benchmarking
- docs/optimization/ (existing) - Performance optimization

**Files Moved:**
FROM ROOT:
- AGENTICDB_QUICKSTART.md → docs/getting-started/
- OPTIMIZATION_QUICK_START.md → docs/getting-started/
- PHASE5_COMPLETE.md → docs/project-phases/

FROM DOCS ROOT:
- AGENTICDB_API.md → docs/getting-started/
- advanced-features.md → docs/getting-started/
- wasm-api.md → docs/getting-started/
- wasm-build-guide.md → docs/getting-started/
- quick-fix-guide.md → docs/getting-started/
- CONTRIBUTING.md → docs/development/
- MIGRATION.md → docs/development/
- FIXING_COMPILATION_ERRORS.md → docs/development/
- TDD_TEST_SUITE_SUMMARY.md → docs/testing/
- integration-testing-report.md → docs/testing/
- PHASE*.md (8 files) → docs/project-phases/
- phase*.md (3 files) → docs/project-phases/

### Documentation Created
- docs/README.md - Complete documentation index with navigation
- docs/.gitkeep - Structure explanation

### Updated References
- README.md - Updated all documentation links to new locations
- Added Documentation Index link
- Added Contributing Guidelines section with multiple links

### .gitignore Enhanced
- Added rules for test files and binaries
- Added rules for hidden duplicates
- Added rules for temporary files
- Added documentation build artifacts

## Results

**Before:**
- Root: 12+ files including tests, duplicates
- Docs: Flat structure with 30+ files
- Difficult to navigate

**After:**
- Root: 8 essential files only 
- Docs: 42 files in 10 organized categories 
- Clear navigation with README.md 
- No duplicates or test files 

**File Organization:**
- Total documentation: 42 markdown files
- Properly categorized by purpose
- Easy to find and navigate
- Professional structure

Repository is now clean, organized, and production-ready! 🎉
2025-11-20 19:50:03 +00:00