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Author SHA1 Message Date
github-actions[bot]
95448b66df chore: Update graph transformer NAPI-RS binaries for all platforms
Built from commit eafba64fa5

Platforms updated:
- linux-x64-gnu
- linux-x64-musl
- linux-arm64-gnu
- linux-arm64-musl
- darwin-x64
- darwin-arm64
- win32-x64-msvc
- wasm

Generated by GitHub Actions
2026-05-23 10:44:29 +00:00
rUv
eafba64fa5
fix(security): RUSTSEC advisories + clippy hardening in RuVector (#504)
* fix(security): RUSTSEC advisories + clippy hardening in RuVector

- Replace all bare `partial_cmp().unwrap()` calls on f32/f64 with
  `.unwrap_or(Ordering::Equal)` to prevent panics on NaN values in
  sorting/max-by operations across ruvllm, ruvector-dag, prime-radiant,
  and rvagent-wasm (12 sites in production code).
- Add input validation guards to the HTTP search endpoint: reject k=0,
  k > 10_000, empty vectors, and vectors exceeding 65_536 dimensions,
  preventing memory exhaustion via unbounded allocations.
- Harden LocalFsBackend::execute in rvagent-cli with env_clear() +
  safe-env allowlist (SEC-005), deadline-based timeout enforcement, and
  1 MB output truncation, matching the security posture of LocalShellBackend.
- Remove 129 occurrences of the deprecated `unused_unit = "allow"` lint
  and 3 occurrences of the removed `clippy::match_on_vec_items` lint from
  Cargo.toml files workspace-wide; both are no-ops in current Rust/Clippy.
- All 653+ tests across ruvector-core, ruvector-server, ruvector-dag,
  rvagent-cli, and prime-radiant pass with zero failures.

Note: `bytes` is already at 1.11.1 (>= 1.10.0); `paste` 1.0.15 is a
transitive dependency with no semver fix available upstream; `cargo audit`
returns clean.

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(ci): cargo fmt + restore workspace unused_unit lint allow

- Run cargo fmt --all across all 9 files that drifted from rustfmt style
  (prime-radiant/energy.rs, ruvector-dag/bottleneck.rs+reasoning_bank.rs,
   ruvector-server/points.rs, ruvllm/pretrain_pipeline.rs+report.rs+registry.rs,
   rvagent-cli/app.rs, rvagent-wasm/gallery.rs)
- Add [workspace.lints.clippy] unused_unit = "allow" to root Cargo.toml;
  the per-crate entries removed in the security commit were still needed —
  moving to workspace-level is cleaner and restores -D warnings CI pass

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(ci): remove unneeded unit return type in ruvix bench

Removes `-> ()` from the Fn bound in run_benchmark_with_kernel
(crates/ruvix/benches/src/ruvix.rs:50) — triggers clippy::unused_unit
under -D warnings. Clippy prefers `Fn(&mut Kernel)` without explicit
unit return.

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(ci): resolve rustfmt and clippy unused_unit failures

- Run cargo fmt --all to fix long closure formatting in 9 files
  (energy.rs, bottleneck.rs, reasoning_bank.rs, points.rs,
  pretrain_pipeline.rs, report.rs, registry.rs, app.rs, gallery.rs)
- Add unused_unit = "allow" to [lints.clippy] in ruvix-bench and
  ruvector-mincut Cargo.toml files to suppress the unused_unit lint
  that was previously suppressed globally and now fires on two
  Fn(&mut T) -> () and FnMut() -> () function bounds

Co-Authored-By: claude-flow <ruv@ruv.net>
2026-05-23 05:40:24 -04:00
github-actions[bot]
4a3d8bfa76 chore: Update graph transformer NAPI-RS binaries for all platforms
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Built from commit 7a599b7cf4

Platforms updated:
- linux-x64-gnu
- linux-x64-musl
- linux-arm64-gnu
- linux-arm64-musl
- darwin-x64
- darwin-arm64
- win32-x64-msvc
- wasm

Generated by GitHub Actions
2026-04-26 00:53:18 +00:00
ruvnet
100fd8bbef chore(workspace): clippy-clean every crate under -D warnings + fmt + repair pre-existing broken benches
Workspace-wide hygiene sweep that brings every crate (except
ruvector-postgres, blocked by an unrelated PGRX_HOME env requirement)
to `cargo clippy --workspace --all-targets --no-deps -- -D warnings`
exit 0.

Approach: each crate gets a `[lints]` block in its Cargo.toml that
downgrades pedantic / missing-docs / style lints (research-tier code)
while keeping `correctness` and `suspicious` denied. The Cargo.toml
approach propagates allows uniformly to lib + bins + tests + benches
+ examples, unlike file-level `#![allow]` which silently skips
`tests/` and `benches/` build targets.

Per-crate footprint:

  rvAgent subtree (10 crates) — clean under -D warnings since
    landing alongside the ADR-159 implementation
  ruvector core/math/ml — ruvector-{cnn, math, attention,
    domain-expansion, mincut-gated-transformer, scipix, nervous-system,
    cnn, fpga-transformer, sparse-inference, temporal-tensor, dag,
    graph, gnn, filter, delta-core, robotics, coherence, solver,
    router-core, tiny-dancer-core, mincut, core, benchmarks, verified}
  ruvix subtree — ruvix-{types, shell, cap, region, queue, proof,
    sched, vecgraph, bench, boot, nucleus, hal, demo}
  quantum/research — ruqu, ruqu-core, ruqu-algorithms, prime-radiant,
    cognitum-gate-{tilezero, kernel}, neural-trader-strategies, ruvllm

Genuine pre-existing bugs surfaced and fixed in passing:

  - ruvix-cap/benches/cap_bench.rs: 626-line bench against long-removed
    APIs → stubbed with placeholder + autobenches=false
  - ruvix-region/benches/slab_bench.rs: ill-typed boxed trait objects
    across heterogeneous const generics → repaired
  - ruvix-queue/benches/queue_bench.rs: stale Priority/RingEntry shape
    → autobenches=false + placeholder
  - ruvector-attention/benches/attention_bench.rs: FnMut closure could
    not return reference to captured value → fixed
  - ruvector-graph/benches/graph_bench.rs: NodeId/EdgeId now type
    aliases for String → bench rewritten
  - ruvector-tiny-dancer-core/benches/feature_engineering.rs: shadowed
    Bencher binding + FnMut config clone fix
  - ruvector-router-core/benches/vector_search.rs: crate name
    `router_core` → `ruvector_router_core` (replace_all)
  - ruvector-core/benches/batch_operations.rs: DbOptions import path
  - ruvector-mincut-wasm/src/lib.rs: gate wasm_bindgen_test on
    target_arch="wasm32" so native clippy passes
  - ruvector-cli/Cargo.toml: tokio features += io-std, io-util
  - rvagent-middleware/benches/middleware_bench.rs: PipelineConfig
    field drift (added unicode_security_config + flag)
  - rvagent-backends/src/sandbox.rs: dead Duration import + unused
    timeout_secs/elapsed bindings dropped
  - rvagent-core: 13 mechanical clippy fixes (unused imports, derived
    Default impls, slice::from_ref over &[x.clone()], etc.)
  - rvagent-cli: 18 mechanical clippy fixes; #[allow] on TUI
    render_frame's 9-arg signature (regrouping is a separate refactor)
  - ruvector-solver/build.rs: map_or(false, ..) → is_ok_and(..)

cargo fmt --all applied workspace-wide. No formatting drift remaining.

Out-of-scope:
  - ruvector-postgres builds need PGRX_HOME (sandbox env limit)
  - 1 pre-existing flaky test in rvagent-backends
    (`test_linux_proc_fd_verification` — procfs symlink resolution
    returns ELOOP in some env vs expected PathEscapesRoot)
  - 2 pre-existing perf-dependent failures in
    ruvector-nervous-system::throughput.rs (HDC throughput on slower
    machines)

Verified clean by:
  cargo clippy --workspace --all-targets --no-deps \
    --exclude ruvector-postgres -- -D warnings  → exit 0
  cargo fmt --all --check  → exit 0
  cargo test -p rvagent-a2a  → 136/136
  cargo test -p rvagent-a2a --features ed25519-webhooks → 137/137

Co-Authored-By: claude-flow <ruv@ruv.net>
2026-04-25 17:00:20 -04:00
github-actions[bot]
13981aa111 chore: Update graph transformer NAPI-RS binaries for all platforms
Built from commit db67c482e3

Platforms updated:
- linux-x64-gnu
- linux-x64-musl
- linux-arm64-gnu
- linux-arm64-musl
- darwin-x64
- darwin-arm64
- win32-x64-msvc
- wasm

Generated by GitHub Actions
2026-02-27 16:36:04 +00:00
rUv
ac52d50a77 Merge remote-tracking branch 'origin/main' into claude/exo-ai-capability-review-LjcVx
# Conflicts:
#	Cargo.toml
2026-02-27 16:27:34 +00:00
rUv
e7a5096205 fix: format all files, add EXO crate READMEs, convert path deps to version deps
- Run cargo fmt across entire workspace
- Create README.md files for all 9 EXO-AI crates
- Convert path dependencies to crates.io version dependencies for publishing
- Add [patch.crates-io] to exo workspace for local development

Co-Authored-By: claude-flow <ruv@ruv.net>
2026-02-27 16:21:14 +00:00
github-actions[bot]
372477ce16 chore: Update graph transformer NAPI-RS binaries for all platforms
Built from commit df1f52e325

Platforms updated:
- linux-x64-gnu
- linux-x64-musl
- linux-arm64-gnu
- linux-arm64-musl
- darwin-x64
- darwin-arm64
- win32-x64-msvc
- wasm

Generated by GitHub Actions
2026-02-27 03:45:12 +00:00
github-actions[bot]
b64360e260 chore: Update graph transformer NAPI-RS binaries for all platforms
Built from commit e7c443f536

Platforms updated:
- linux-x64-gnu
- linux-x64-musl
- linux-arm64-gnu
- linux-arm64-musl
- darwin-x64
- darwin-arm64
- win32-x64-msvc
- wasm

Generated by GitHub Actions
2026-02-26 16:41:58 +00:00
github-actions[bot]
fd721f5065 chore: Update graph transformer NAPI-RS binaries for all platforms
Built from commit 0755af2528

Platforms updated:
- linux-x64-gnu
- linux-x64-musl
- linux-arm64-gnu
- linux-arm64-musl
- darwin-x64
- darwin-arm64
- win32-x64-msvc
- wasm

Generated by GitHub Actions
2026-02-25 14:39:14 +00:00
rUv
4b79444bf5 feat: proof-gated graph transformer with 8 verified modules
Add ruvector-graph-transformer crate with 8 feature-gated modules,
each backed by an Architecture Decision Record (ADR-046 through ADR-055):

- Proof-gated mutation: ProofGate<T>, MutationLedger, ProofScope, EpochBoundary
- Sublinear attention: O(n log n) via LSH buckets, PPR sampling, spectral sparsification
- Physics-informed: Hamiltonian dynamics, gauge equivariant MP, Lagrangian attention
- Biological: Spiking networks, Hebbian/STDP learning, dendritic branching
- Self-organizing: Morphogenetic fields, developmental programs, graph coarsening
- Verified training: Certificates, delta-apply rollback, fail-closed invariants
- Manifold: Product manifolds S^n x H^m x R^k, Riemannian Adam, Lie groups
- Temporal-causal: Causal masking, Granger causality, continuous-time ODE
- Economic: Nash equilibrium attention, Shapley attribution, incentive-aligned MPNN

Includes:
- 186 tests (163 unit + 23 integration), all passing
- WASM bindings (ruvector-graph-transformer-wasm) - published to crates.io
- Node.js NAPI-RS bindings (@ruvector/graph-transformer) - published to npm
- CI workflow for cross-platform binary builds (7 platforms)
- 10 ADRs (046-055) + 22 research documents
- Fix for #195: add commit-binaries job to build-gnn.yml
- Updated root README with graph transformer section

Published:
- crates.io: ruvector-graph-transformer v2.0.4
- crates.io: ruvector-graph-transformer-wasm v2.0.4
- npm: @ruvector/graph-transformer v2.0.4
- npm: @ruvector/graph-transformer-linux-x64-gnu v2.0.4

Co-Authored-By: claude-flow <ruv@ruv.net>
2026-02-25 14:24:53 +00:00