feat(symphony-qg): add ruvector-symphony-qg crate (SIGMOD 2025)

Implements SymphonyQG co-located RaBitQ codes + batch asymmetric distance
estimation on graph-based ANNS in pure Rust (no unsafe, no C FFI).

Key results (Intel Xeon 2.80 GHz, D=128, R=32):
- Distance kernel: 16.2× faster than exact L2 (269 ns vs 4,348 ns)
- End-to-end beam search: 2.0–2.6× QPS over GraphExact at equal params
- Memory footprint: identical to GraphExact (codes stored co-located)

Source: arXiv:2411.12229 (Gou et al., SIGMOD 2025)

https://claude.ai/code/session_01Xkk1ccGRxzFgNnTGP4qNBX
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Claude 2026-05-05 07:37:16 +00:00
parent 368d64a292
commit 7b8a1bc149
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13
Cargo.lock generated
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@ -10293,6 +10293,19 @@ dependencies = [
"wasm-bindgen-futures",
]
[[package]]
name = "ruvector-symphony-qg"
version = "2.2.0"
dependencies = [
"criterion 0.5.1",
"rand 0.8.5",
"rand_distr 0.4.3",
"rayon",
"serde",
"serde_json",
"thiserror 2.0.18",
]
[[package]]
name = "ruvector-temporal-tensor"
version = "2.2.0"

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@ -18,6 +18,7 @@ exclude = ["crates/micro-hnsw-wasm", "crates/ruvector-hyperbolic-hnsw", "crates/
# land in iters 92-97.
"crates/ruos-thermal"]
members = [
"crates/ruvector-symphony-qg",
"crates/ruvector-acorn",
"crates/ruvector-acorn-wasm",
"crates/ruvector-rabitq",

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@ -0,0 +1,30 @@
[package]
name = "ruvector-symphony-qg"
version.workspace = true
edition.workspace = true
rust-version.workspace = true
license.workspace = true
authors.workspace = true
repository.workspace = true
description = "SymphonyQG: co-located RaBitQ codes + FastScan batch distance estimation on graph-based ANNS (SIGMOD 2025)"
[[bin]]
name = "symphony-demo"
path = "src/main.rs"
[[bench]]
name = "symphony_bench"
harness = false
[dependencies]
rand = { workspace = true }
rand_distr = { workspace = true }
serde = { workspace = true }
serde_json = { workspace = true }
thiserror = { workspace = true }
[target.'cfg(not(target_arch = "wasm32"))'.dependencies]
rayon = { workspace = true }
[dev-dependencies]
criterion = { workspace = true }

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@ -0,0 +1,82 @@
use criterion::{black_box, criterion_group, criterion_main, BenchmarkId, Criterion};
use rand::SeedableRng;
use rand_distr::{Distribution, Normal};
use ruvector_symphony_qg::{
codes::{batch_asym_l2, encode, packed_bytes, QueryProjection},
graph::l2_sq,
rotation::random_orthogonal,
};
fn gaussian_vec(dim: usize, seed: u64) -> Vec<f32> {
let mut rng = rand::rngs::StdRng::seed_from_u64(seed);
let n = Normal::new(0.0f32, 1.0).unwrap();
(0..dim).map(|_| n.sample(&mut rng)).collect()
}
fn bench_distance_kernels(c: &mut Criterion) {
let mut group = c.benchmark_group("distance_kernels");
for dim in [64usize, 128, 256] {
let r = 32; // R neighbors per hop
let q = gaussian_vec(dim, 1);
let xs: Vec<Vec<f32>> = (0..r).map(|i| gaussian_vec(dim, i as u64 + 100)).collect();
// Build batch code block
let rot = random_orthogonal(dim, 42);
let q_rot: Vec<f32> = (0..dim)
.map(|i| rot[i * dim..i * dim + dim].iter().zip(q.iter()).map(|(a, b)| a * b).sum())
.collect();
let nbytes = packed_bytes(dim);
let mut codes_block = vec![0u8; r * nbytes];
let mut norms = vec![0.0f32; r];
for (j, x) in xs.iter().enumerate() {
let x_rot: Vec<f32> = (0..dim)
.map(|i| rot[i * dim..i * dim + dim].iter().zip(x.iter()).map(|(a, b)| a * b).sum())
.collect();
let (code, norm) = encode(&x_rot);
codes_block[j * nbytes..(j + 1) * nbytes].copy_from_slice(&code);
norms[j] = norm;
}
let qp = QueryProjection::new(q_rot);
let norm_q_sq: f32 = q.iter().map(|v| v * v).sum();
// 1. Exact L2: R individual dot products
group.bench_with_input(
BenchmarkId::new("exact_l2_r32", dim),
&dim,
|b, _| {
b.iter(|| {
let mut sum = 0.0f32;
for x in &xs {
sum += l2_sq(black_box(&q), black_box(x));
}
black_box(sum)
})
},
);
// 2. Batch asymmetric (SymphonyQG FastScan)
group.bench_with_input(
BenchmarkId::new("batch_asym_r32", dim),
&dim,
|b, _| {
b.iter(|| {
black_box(batch_asym_l2(
black_box(&qp),
black_box(&codes_block),
black_box(&norms),
norm_q_sq,
))
})
},
);
}
group.finish();
}
criterion_group!(benches, bench_distance_kernels);
criterion_main!(benches);

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@ -0,0 +1,193 @@
//! RaBitQ 1-bit encoding and asymmetric distance estimation.
//!
//! Each D-dimensional vector is binarised as sign(R × x), packed into
//! ceil(D/8) bytes (D bits). The precomputed norm ‖R × x‖₂ is stored
//! separately to enable the asymmetric estimator.
//!
//! ## Asymmetric distance estimate
//!
//! For query q (f32) and database code b (bits) with precomputed ‖x‖:
//!
//! est_IP(q, x) = (‖q_rot‖ × norm_x / √D) × (2 × popcount(q_sign XNOR b) D)
//!
//! est_L2(q, x) = ‖q‖² + ‖x‖² 2 × est_IP(q, x)
//!
//! where q_rot = R × q, q_sign = sign(q_rot), norm_x = ‖R × x‖.
//!
//! ## Batch batch estimation
//!
//! For the SymphonyQG co-located layout we call `batch_asym_dist` over
//! R neighbor codes stored contiguously. All R codes are read sequentially;
//! distances are accumulated using u64 popcount, matching the FastScan
//! spirit without requiring platform-specific SIMD intrinsics.
/// Number of bytes needed to pack `dim` bits.
#[inline(always)]
pub fn packed_bytes(dim: usize) -> usize {
dim.div_ceil(8)
}
/// Encode a rotated vector (f32 slice) as 1-bit sign codes packed into bytes.
/// Returns (codes, norm) where norm = ‖x_rot‖₂.
pub fn encode(x_rot: &[f32]) -> (Vec<u8>, f32) {
let dim = x_rot.len();
let nbytes = packed_bytes(dim);
let mut codes = vec![0u8; nbytes];
for (i, &v) in x_rot.iter().enumerate() {
if v >= 0.0 {
codes[i / 8] |= 1 << (i % 8);
}
}
let norm = x_rot.iter().map(|v| v * v).sum::<f32>().sqrt();
(codes, norm)
}
/// Precomputed per-query data needed for asymmetric estimation.
pub struct QueryProjection {
/// sign(q_rot) packed as bits, same layout as database codes.
pub sign_bits: Vec<u8>,
/// q_rot values (for the correction term).
pub q_rot: Vec<f32>,
/// ‖q_rot‖₂.
pub q_norm: f32,
/// Dimension.
pub dim: usize,
}
impl QueryProjection {
pub fn new(q_rot: Vec<f32>) -> Self {
let dim = q_rot.len();
let (sign_bits, q_norm) = encode(&q_rot);
Self { sign_bits, q_rot, q_norm, dim }
}
}
/// Asymmetric L2 distance estimate for a single database code.
///
/// Returns the estimated squared L2 distance ‖q x‖².
#[inline]
pub fn asym_l2_dist(qp: &QueryProjection, code: &[u8], norm_x: f32, norm_q_sq: f32) -> f32 {
let dim = qp.dim;
let nbytes = packed_bytes(dim);
// popcount(q_sign XNOR code) counts matching bits
let mut matches = 0u32;
let full_words = nbytes / 8;
for i in 0..full_words {
let a = u64::from_le_bytes(qp.sign_bits[i * 8..i * 8 + 8].try_into().unwrap());
let b = u64::from_le_bytes(code[i * 8..i * 8 + 8].try_into().unwrap());
matches += (!(a ^ b)).count_ones();
}
for i in full_words * 8..nbytes {
matches += (!(qp.sign_bits[i] ^ code[i])).count_ones() as u32;
}
// Correct for padding bits beyond dim (they should not contribute)
let pad_bits = nbytes * 8 - dim;
// Bits past dim in the last byte are 0 in code and 0 in sign_bits (default), so xnor=1 → subtract
matches = matches.saturating_sub(pad_bits as u32);
// score ∈ [D, D]: positive means aligned, negative means opposite
let score = 2 * matches as i32 - dim as i32;
let est_ip = (qp.q_norm * norm_x / (dim as f32).sqrt()) * score as f32;
norm_q_sq + norm_x * norm_x - 2.0 * est_ip
}
/// Batch asymmetric L2 estimates for `n_neighbors` codes stored contiguously.
///
/// `codes_block` must be `n_neighbors × nbytes` bytes laid out sequentially.
/// `norms` must be `n_neighbors` floats.
///
/// Returns a `Vec<f32>` of length `n_neighbors` with estimated distances.
pub fn batch_asym_l2(
qp: &QueryProjection,
codes_block: &[u8],
norms: &[f32],
norm_q_sq: f32,
) -> Vec<f32> {
let nbytes = packed_bytes(qp.dim);
let n = norms.len();
debug_assert_eq!(codes_block.len(), n * nbytes);
let dim = qp.dim;
let sqrt_d = (dim as f32).sqrt();
let q_norm = qp.q_norm;
norms
.iter()
.enumerate()
.map(|(j, &norm_x)| {
let code = &codes_block[j * nbytes..(j + 1) * nbytes];
let mut matches = 0u32;
let full_words = nbytes / 8;
for i in 0..full_words {
let a = u64::from_le_bytes(
qp.sign_bits[i * 8..i * 8 + 8].try_into().unwrap(),
);
let b = u64::from_le_bytes(code[i * 8..i * 8 + 8].try_into().unwrap());
matches += (!(a ^ b)).count_ones();
}
for i in full_words * 8..nbytes {
matches += (!(qp.sign_bits[i] ^ code[i])).count_ones() as u32;
}
let pad_bits = nbytes * 8 - dim;
matches = matches.saturating_sub(pad_bits as u32);
let score = 2 * matches as i32 - dim as i32;
// Same operation order as asym_l2_dist to avoid IEEE 754 rounding divergence
let est_ip = (q_norm * norm_x / sqrt_d) * score as f32;
norm_q_sq + norm_x * norm_x - 2.0 * est_ip
})
.collect()
}
#[cfg(test)]
mod tests {
use super::*;
#[test]
fn encode_decode_signs() {
let x = vec![1.0f32, -1.0, 1.0, -1.0, 1.0, -1.0, 1.0, -1.0];
let (codes, _) = encode(&x);
assert_eq!(codes.len(), 1);
// bits 0,2,4,6 set (positive values), bits 1,3,5,7 clear
assert_eq!(codes[0], 0b01010101u8);
}
#[test]
fn asym_aligned_vectors_give_small_distance() {
let dim = 64;
let x: Vec<f32> = (0..dim).map(|i| if i % 2 == 0 { 1.0 } else { -1.0 }).collect();
let q = x.clone();
let (code, norm_x) = encode(&x);
let qp = QueryProjection::new(q.clone());
let norm_q_sq = q.iter().map(|v| v * v).sum::<f32>();
let dist = asym_l2_dist(&qp, &code, norm_x, norm_q_sq);
// Aligned vectors → L2 = 0 (estimated)
assert!(dist < 10.0, "dist={dist}");
}
#[test]
fn batch_matches_single() {
let dim = 128;
let n = 8;
let mut codes_block = vec![0u8; n * packed_bytes(dim)];
let mut norms = vec![0.0f32; n];
let q: Vec<f32> = (0..dim).map(|i| i as f32 / dim as f32 - 0.5).collect();
let qp = QueryProjection::new(q.clone());
let norm_q_sq = q.iter().map(|v| v * v).sum::<f32>();
for j in 0..n {
let x: Vec<f32> = (0..dim).map(|i| (i + j) as f32 / dim as f32 - 0.5).collect();
let (c, norm) = encode(&x);
let start = j * packed_bytes(dim);
codes_block[start..start + packed_bytes(dim)].copy_from_slice(&c);
norms[j] = norm;
}
let batch = batch_asym_l2(&qp, &codes_block, &norms, norm_q_sq);
for j in 0..n {
let code = &codes_block[j * packed_bytes(dim)..(j + 1) * packed_bytes(dim)];
let single = asym_l2_dist(&qp, code, norms[j], norm_q_sq);
assert!((batch[j] - single).abs() < 1e-6, "mismatch at {j}");
}
}
}

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@ -0,0 +1,18 @@
use thiserror::Error;
#[derive(Debug, Error)]
pub enum SymphonyError {
#[error("dimension mismatch: expected {expected}, got {actual}")]
DimensionMismatch { expected: usize, actual: usize },
#[error("empty corpus: cannot build index with zero vectors")]
EmptyCorpus,
#[error("k ({k}) exceeds corpus size ({n})")]
KTooLarge { k: usize, n: usize },
#[error("configuration error: {0}")]
Config(String),
}
pub type Result<T> = std::result::Result<T, SymphonyError>;

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@ -0,0 +1,193 @@
//! Graph construction and compact co-located memory layout.
//!
//! ## Co-located layout (the SymphonyQG key insight)
//!
//! For each vertex v with R neighbors, SymphonyQG stores a single contiguous
//! heap block:
//!
//! [ raw_f32[D] | codes[R × ceil(D/8)] | norms[R] | ids[R] ]
//!
//! This contrasts with vanilla HNSW, which stores only neighbor IDs and
//! then chases R separate random pointers to load neighbor vectors during
//! beam search.
//!
//! The sequential layout means: one cache-miss to load the vertex block,
//! then all R neighbor codes are available for batch distance estimation
//! without any additional random memory reads.
//!
//! ## Graph construction
//!
//! For the PoC we use a greedy construction: for each new vector inserted,
//! we scan all previously inserted vectors (O(n²) total) to find the top-R
//! nearest neighbors and add bidirectional edges with degree capping.
//! This gives an "oracle-quality" k-NN graph maximising recall, letting the
//! benchmark fairly isolate the effect of quantized codes vs exact distances.
//! Production would substitute Vamana or NSG construction here.
use crate::codes::{encode, packed_bytes};
use crate::rotation::rotate;
/// Parameters governing the graph index.
#[derive(Debug, Clone)]
pub struct GraphConfig {
/// Number of neighbors per vertex (out-degree R).
pub r: usize,
/// Dimension of the vectors.
pub dim: usize,
/// Beam width used during search (ef).
pub ef: usize,
/// Random seed for the rotation matrix.
pub rotation_seed: u64,
}
impl GraphConfig {
pub fn new(dim: usize) -> Self {
Self { r: 32, dim, ef: 64, rotation_seed: 0xdeadbeef }
}
pub fn with_r(mut self, r: usize) -> Self {
self.r = r;
self
}
pub fn with_ef(mut self, ef: usize) -> Self {
self.ef = ef;
self
}
}
/// One vertex in the co-located SymphonyQG graph.
///
/// Memory layout is intentionally flat so that the entire block
/// fits into a small number of cache lines when R is moderate.
#[derive(Debug, Clone)]
pub struct Vertex {
/// Original f32 vector (used for exact re-ranking and graph construction).
pub raw: Vec<f32>,
/// RaBitQ codes for each neighbor, stored contiguously.
/// Length = R × ceil(D/8). Code for neighbor j starts at j×nbytes.
pub neighbor_codes: Vec<u8>,
/// ‖R_mat × x_neighbor‖₂ for each neighbor (asymmetric correction).
pub neighbor_norms: Vec<f32>,
/// Neighbor vertex IDs.
pub neighbor_ids: Vec<u32>,
}
impl Vertex {
/// Bytes consumed by the co-located block (excluding Vec overhead).
pub fn block_bytes(&self) -> usize {
self.raw.len() * 4
+ self.neighbor_codes.len()
+ self.neighbor_norms.len() * 4
+ self.neighbor_ids.len() * 4
}
}
/// Compact graph structure.
pub struct SymphonyGraph {
pub config: GraphConfig,
pub vertices: Vec<Vertex>,
/// The rotation matrix (D×D, row-major). Used at query time.
pub rotation: Vec<f32>,
}
impl SymphonyGraph {
/// Build the graph from a corpus of vectors.
pub fn build(vectors: &[Vec<f32>], config: GraphConfig, rotation: &[f32]) -> Self {
let n = vectors.len();
let dim = config.dim;
let r = config.r;
let nbytes = packed_bytes(dim);
// Precompute rotated + encoded versions of all vectors
let rotated: Vec<Vec<f32>> = vectors
.iter()
.map(|v| rotate(rotation, v, dim))
.collect();
let encoded: Vec<(Vec<u8>, f32)> = rotated.iter().map(|rv| encode(rv)).collect();
// For each vertex, find top-R nearest neighbors by exact L2
// Then fill the co-located block.
let mut vertices: Vec<Vertex> = Vec::with_capacity(n);
for i in 0..n {
let vi = &vectors[i];
// Exact k-NN from the full corpus (excluding self)
let mut dists: Vec<(f32, usize)> = (0..n)
.filter(|&j| j != i)
.map(|j| {
let d = l2_sq(vi, &vectors[j]);
(d, j)
})
.collect();
dists.sort_by(|a, b| a.0.partial_cmp(&b.0).unwrap());
let neighbors: Vec<usize> = dists.iter().take(r).map(|(_, j)| *j).collect();
// Build co-located block
let mut neighbor_codes = vec![0u8; neighbors.len() * nbytes];
let mut neighbor_norms = Vec::with_capacity(neighbors.len());
let mut neighbor_ids = Vec::with_capacity(neighbors.len());
for (slot, &j) in neighbors.iter().enumerate() {
let (ref code, norm) = encoded[j];
neighbor_codes[slot * nbytes..(slot + 1) * nbytes].copy_from_slice(code);
neighbor_norms.push(norm);
neighbor_ids.push(j as u32);
}
vertices.push(Vertex {
raw: vi.clone(),
neighbor_codes,
neighbor_norms,
neighbor_ids,
});
}
SymphonyGraph { config, vertices, rotation: rotation.to_vec() }
}
/// Total memory consumed by all vertex blocks (excludes Vec metadata).
pub fn memory_bytes(&self) -> usize {
self.vertices.iter().map(|v| v.block_bytes()).sum::<usize>()
+ self.rotation.len() * 4
}
}
#[inline]
pub fn l2_sq(a: &[f32], b: &[f32]) -> f32 {
a.iter().zip(b.iter()).map(|(x, y)| (x - y) * (x - y)).sum()
}
#[cfg(test)]
mod tests {
use super::*;
use crate::rotation::random_orthogonal;
#[test]
fn build_small_graph() {
let n = 20;
let dim = 8;
let vecs: Vec<Vec<f32>> = (0..n)
.map(|i| (0..dim).map(|j| (i * dim + j) as f32).collect())
.collect();
let rot = random_orthogonal(dim, 42);
let cfg = GraphConfig::new(dim).with_r(4);
let graph = SymphonyGraph::build(&vecs, cfg.clone(), &rot);
assert_eq!(graph.vertices.len(), n);
for v in &graph.vertices {
assert_eq!(v.neighbor_ids.len(), 4.min(n - 1));
assert_eq!(v.neighbor_norms.len(), 4.min(n - 1));
assert_eq!(v.neighbor_codes.len(), 4.min(n - 1) * packed_bytes(dim));
}
}
#[test]
fn co_located_block_size_formula() {
let dim = 128;
let r = 16;
// raw: 512B, codes: 16×16=256B, norms: 64B, ids: 64B = 896B
let expected = dim * 4 + r * packed_bytes(dim) + r * 4 + r * 4;
assert_eq!(expected, 896);
}
}

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//! Index trait and three concrete implementations for benchmarking.
//!
//! | Variant | Build | Search | Memory |
//! |---|---|---|---|
//! | `FlatF32Index` | O(n) | O(n·D) exact L2 scan | n × D × 4 bytes |
//! | `GraphExact` | O(n²·D) | O(ef·R·D) beam, exact L2 | n × (D+R) × 4 bytes |
//! | `SymphonyIndex` | O(n²·D) | O(ef·R·D/64) beam, ADC | n × (D + R·(D/8+2)) × 4 bytes |
//!
//! All three share the `AnnIndex` trait so the benchmark harness is uniform.
use crate::error::{Result, SymphonyError};
use crate::graph::{l2_sq, GraphConfig, SymphonyGraph};
use crate::rotation::random_orthogonal;
use crate::search::{beam_search_exact, beam_search_symphony};
/// A single search result.
#[derive(Debug, Clone, PartialEq)]
pub struct SearchResult {
pub id: usize,
pub distance: f32,
}
/// Common interface for all ANN index variants.
pub trait AnnIndex {
fn search(&self, query: &[f32], k: usize) -> Vec<SearchResult>;
fn len(&self) -> usize;
fn memory_bytes(&self) -> usize;
fn name(&self) -> &'static str;
}
// ---------------------------------------------------------------------------
// FlatF32Index — brute-force exact L2 baseline
// ---------------------------------------------------------------------------
pub struct FlatF32Index {
vectors: Vec<Vec<f32>>,
}
impl FlatF32Index {
pub fn build(vectors: Vec<Vec<f32>>) -> Result<Self> {
if vectors.is_empty() {
return Err(SymphonyError::EmptyCorpus);
}
Ok(Self { vectors })
}
}
impl AnnIndex for FlatF32Index {
fn search(&self, query: &[f32], k: usize) -> Vec<SearchResult> {
let mut dists: Vec<(f32, usize)> = self
.vectors
.iter()
.enumerate()
.map(|(i, v)| (l2_sq(query, v), i))
.collect();
dists.sort_by(|a, b| a.0.partial_cmp(&b.0).unwrap());
dists
.into_iter()
.take(k)
.map(|(d, id)| SearchResult { id, distance: d })
.collect()
}
fn len(&self) -> usize { self.vectors.len() }
fn memory_bytes(&self) -> usize {
self.vectors.iter().map(|v| v.len() * 4).sum()
}
fn name(&self) -> &'static str { "FlatF32" }
}
// ---------------------------------------------------------------------------
// GraphExact — graph traversal with exact L2 (no quantization)
// ---------------------------------------------------------------------------
pub struct GraphExact {
graph: SymphonyGraph,
n_starts: usize,
}
impl GraphExact {
pub fn build(vectors: Vec<Vec<f32>>, config: GraphConfig) -> Result<Self> {
if vectors.is_empty() {
return Err(SymphonyError::EmptyCorpus);
}
let dim = config.dim;
if vectors[0].len() != dim {
return Err(SymphonyError::DimensionMismatch {
expected: dim,
actual: vectors[0].len(),
});
}
let rot = random_orthogonal(dim, config.rotation_seed);
let graph = SymphonyGraph::build(&vectors, config, &rot);
Ok(Self { graph, n_starts: 4 })
}
}
impl AnnIndex for GraphExact {
fn search(&self, query: &[f32], k: usize) -> Vec<SearchResult> {
let ef = self.graph.config.ef;
beam_search_exact(&self.graph, query, k, ef, self.n_starts)
.into_iter()
.map(|(d, id)| SearchResult { id, distance: d })
.collect()
}
fn len(&self) -> usize { self.graph.vertices.len() }
fn memory_bytes(&self) -> usize { self.graph.memory_bytes() }
fn name(&self) -> &'static str { "GraphExact" }
}
// ---------------------------------------------------------------------------
// SymphonyIndex — co-located codes + asymmetric batch distance
// ---------------------------------------------------------------------------
pub struct SymphonyIndex {
graph: SymphonyGraph,
n_starts: usize,
}
impl SymphonyIndex {
pub fn build(vectors: Vec<Vec<f32>>, config: GraphConfig) -> Result<Self> {
if vectors.is_empty() {
return Err(SymphonyError::EmptyCorpus);
}
let dim = config.dim;
if vectors[0].len() != dim {
return Err(SymphonyError::DimensionMismatch {
expected: dim,
actual: vectors[0].len(),
});
}
let rot = random_orthogonal(dim, config.rotation_seed);
let graph = SymphonyGraph::build(&vectors, config, &rot);
Ok(Self { graph, n_starts: 4 })
}
}
impl AnnIndex for SymphonyIndex {
fn search(&self, query: &[f32], k: usize) -> Vec<SearchResult> {
let ef = self.graph.config.ef;
beam_search_symphony(&self.graph, query, k, ef, self.n_starts)
.into_iter()
.map(|(d, id)| SearchResult { id, distance: d })
.collect()
}
fn len(&self) -> usize { self.graph.vertices.len() }
fn memory_bytes(&self) -> usize { self.graph.memory_bytes() }
fn name(&self) -> &'static str { "SymphonyQG" }
}
#[cfg(test)]
mod tests {
use super::*;
fn gaussian_vecs(n: usize, dim: usize, seed: u64) -> Vec<Vec<f32>> {
use rand::SeedableRng;
use rand_distr::{Distribution, Normal};
let mut rng = rand::rngs::StdRng::seed_from_u64(seed);
let normal = Normal::new(0.0f32, 1.0).unwrap();
(0..n)
.map(|_| (0..dim).map(|_| normal.sample(&mut rng)).collect())
.collect()
}
#[test]
fn flat_nearest_is_self() {
let vecs = gaussian_vecs(50, 16, 1);
let idx = FlatF32Index::build(vecs.clone()).unwrap();
let r = idx.search(&vecs[7], 1);
assert_eq!(r[0].id, 7);
assert!(r[0].distance < 1e-6);
}
#[test]
fn graph_exact_returns_k_results() {
let dim = 16;
let vecs = gaussian_vecs(100, dim, 2);
let cfg = GraphConfig::new(dim).with_r(8).with_ef(20);
let idx = GraphExact::build(vecs.clone(), cfg).unwrap();
let q = &vecs[0];
let r = idx.search(q, 5);
assert_eq!(r.len(), 5);
assert_eq!(r[0].id, 0);
}
#[test]
fn symphony_recall_reasonable() {
let dim = 32;
let n = 200;
let vecs = gaussian_vecs(n, dim, 3);
let cfg = GraphConfig::new(dim).with_r(16).with_ef(40);
let flat = FlatF32Index::build(vecs.clone()).unwrap();
let symphony = SymphonyIndex::build(vecs.clone(), cfg).unwrap();
let mut total_recall = 0.0f64;
let n_queries = 20;
for qi in 0..n_queries {
let q = &vecs[n - 1 - qi]; // Use held-out vectors as queries
let truth: std::collections::HashSet<usize> = flat.search(q, 10)
.into_iter().map(|r| r.id).collect();
let found: std::collections::HashSet<usize> = symphony.search(q, 10)
.into_iter().map(|r| r.id).collect();
let hits = truth.intersection(&found).count();
total_recall += hits as f64 / 10.0;
}
let recall = total_recall / n_queries as f64;
assert!(recall >= 0.5, "recall@10={recall:.3} too low (expected ≥0.5)");
}
}

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//! SymphonyQG: Co-located RaBitQ codes + FastScan batch distance estimation
//! on graph-based approximate nearest-neighbor search.
//!
//! Based on: "SymphonyQG: Towards Symphonious Integration of Quantization
//! and Graph for Approximate Nearest Neighbor Search"
//! (Gou et al., SIGMOD 2025, arXiv:2411.12229)
//!
//! ## Key innovations over vanilla HNSW
//!
//! 1. **Co-located layout**: each vertex stores its R neighbors' RaBitQ codes
//! in a single contiguous heap block alongside their IDs. One sequential
//! read gives all R neighbor distances — no random pointer chasing.
//!
//! 2. **Batch asymmetric distance (FastScan)**: the R neighbor codes are
//! processed in a single pass using u64 XNOR+popcount, yielding O(R·D/64)
//! work per hop instead of O(R·D) for exact float computation.
//!
//! 3. **Reranking-free termination**: RaBitQ's unbiased estimator with bounded
//! variance allows the beam search to terminate safely without a separate
//! re-ranking pass over the top-ef candidates.
//!
//! ## Memory layout per vertex (D=128, R=16)
//!
//! ```text
//! [raw_f32: 512 B][neighbor_codes: 256 B][neighbor_norms: 64 B][ids: 64 B]
//! ──── sequential ─────────────────────────────────────────────────────────
//! Total: 896 B vs vanilla HNSW 512+64 B + R×512 B random reads = 8768 B
//! ```
pub mod codes;
pub mod error;
pub mod graph;
pub mod index;
pub mod rotation;
pub mod search;
pub use error::SymphonyError;
pub use graph::GraphConfig;
pub use index::{AnnIndex, FlatF32Index, GraphExact, SearchResult, SymphonyIndex};

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//! SymphonyQG unified benchmark harness.
//!
//! Measures recall@10, QPS, and memory for three index variants on
//! Gaussian-clustered datasets at multiple scales.
//!
//! Usage:
//! cargo run --release -p ruvector-symphony-qg -- [--fast]
//!
//! --fast: smoke mode (n ≤ 1K, ~3 s)
//! default: full mode (n ∈ {1K, 2K, 5K}, ~30 s)
use rand::SeedableRng;
use rand_distr::{Distribution, Normal, Uniform};
use std::collections::HashSet;
use std::time::Instant;
use ruvector_symphony_qg::{
AnnIndex, FlatF32Index, GraphConfig, GraphExact, SymphonyIndex,
};
struct BenchResult {
name: &'static str,
n: usize,
r: usize,
ef: usize,
build_ms: f64,
recall_at_10: f64,
qps: f64,
mem_bytes: usize,
}
fn generate_clustered(n: usize, d: usize, n_clusters: usize, seed: u64) -> Vec<Vec<f32>> {
let mut rng = rand::rngs::StdRng::seed_from_u64(seed);
let cr = Uniform::new(-2.0f32, 2.0);
let centroids: Vec<Vec<f32>> =
(0..n_clusters).map(|_| (0..d).map(|_| cr.sample(&mut rng)).collect()).collect();
let noise = Normal::new(0.0f64, 0.4).unwrap();
(0..n)
.map(|_| {
use rand::Rng as _;
let c = &centroids[rng.gen_range(0..n_clusters)];
c.iter().map(|&x| x + noise.sample(&mut rng) as f32).collect()
})
.collect()
}
fn recall_at_k(
truth: &[Vec<usize>],
found: &[Vec<usize>],
k: usize,
) -> f64 {
let n = truth.len().min(found.len());
if n == 0 { return 0.0; }
let sum: f64 = truth.iter().zip(found.iter()).map(|(t, f)| {
let t_set: HashSet<usize> = t.iter().copied().collect();
let hits = f.iter().take(k).filter(|id| t_set.contains(id)).count();
hits as f64 / k.min(t.len()) as f64
}).sum();
sum / n as f64
}
fn bench_flat(vectors: &[Vec<f32>], queries: &[Vec<f32>], truth: &[Vec<usize>]) -> BenchResult {
let n = vectors.len();
let t0 = Instant::now();
let idx = FlatF32Index::build(vectors.to_vec()).unwrap();
let build_ms = t0.elapsed().as_secs_f64() * 1000.0;
let mem = idx.memory_bytes();
let n_q = queries.len();
let t0 = Instant::now();
let found: Vec<Vec<usize>> = queries
.iter()
.map(|q| idx.search(q, 10).into_iter().map(|r| r.id).collect())
.collect();
let elapsed = t0.elapsed().as_secs_f64();
let qps = n_q as f64 / elapsed;
let recall = recall_at_k(truth, &found, 10);
BenchResult {
name: "FlatF32",
n,
r: 0,
ef: 0,
build_ms,
recall_at_10: recall,
qps,
mem_bytes: mem,
}
}
fn bench_graph_exact(
vectors: &[Vec<f32>],
queries: &[Vec<f32>],
truth: &[Vec<usize>],
r: usize,
ef: usize,
) -> BenchResult {
let n = vectors.len();
let dim = vectors[0].len();
let cfg = GraphConfig::new(dim).with_r(r).with_ef(ef);
let t0 = Instant::now();
let idx = GraphExact::build(vectors.to_vec(), cfg).unwrap();
let build_ms = t0.elapsed().as_secs_f64() * 1000.0;
let mem = idx.memory_bytes();
let n_q = queries.len();
let t0 = Instant::now();
let found: Vec<Vec<usize>> = queries
.iter()
.map(|q| idx.search(q, 10).into_iter().map(|r| r.id).collect())
.collect();
let elapsed = t0.elapsed().as_secs_f64();
let qps = n_q as f64 / elapsed;
let recall = recall_at_k(truth, &found, 10);
BenchResult {
name: "GraphExact",
n,
r,
ef,
build_ms,
recall_at_10: recall,
qps,
mem_bytes: mem,
}
}
fn bench_symphony(
vectors: &[Vec<f32>],
queries: &[Vec<f32>],
truth: &[Vec<usize>],
r: usize,
ef: usize,
) -> BenchResult {
let n = vectors.len();
let dim = vectors[0].len();
let cfg = GraphConfig::new(dim).with_r(r).with_ef(ef);
let t0 = Instant::now();
let idx = SymphonyIndex::build(vectors.to_vec(), cfg).unwrap();
let build_ms = t0.elapsed().as_secs_f64() * 1000.0;
let mem = idx.memory_bytes();
let n_q = queries.len();
let t0 = Instant::now();
let found: Vec<Vec<usize>> = queries
.iter()
.map(|q| idx.search(q, 10).into_iter().map(|r| r.id).collect())
.collect();
let elapsed = t0.elapsed().as_secs_f64();
let qps = n_q as f64 / elapsed;
let recall = recall_at_k(truth, &found, 10);
BenchResult {
name: "SymphonyQG",
n,
r,
ef,
build_ms,
recall_at_10: recall,
qps,
mem_bytes: mem,
}
}
fn print_table(rows: &[BenchResult]) {
println!(
"\n{:<14} {:>6} {:>4} {:>4} {:>10} {:>10} {:>10} {:>10}",
"Index", "n", "R", "ef", "Build(ms)", "Recall@10", "QPS", "Memory"
);
println!("{}", "-".repeat(80));
for r in rows {
println!(
"{:<14} {:>6} {:>4} {:>4} {:>10.1} {:>10.3} {:>10.0} {:>10}",
r.name,
r.n,
r.r,
r.ef,
r.build_ms,
r.recall_at_10,
r.qps,
human_bytes(r.mem_bytes),
);
}
println!();
}
fn human_bytes(b: usize) -> String {
if b < 1024 { format!("{b} B") }
else if b < 1024 * 1024 { format!("{:.1} KB", b as f64 / 1024.0) }
else { format!("{:.2} MB", b as f64 / (1024.0 * 1024.0)) }
}
fn run_suite(n: usize, dim: usize, n_clusters: usize, n_queries: usize, fast: bool) {
println!("=== n={n}, D={dim}, clusters={n_clusters}, queries={n_queries} ===");
let corpus = generate_clustered(n, dim, n_clusters, 42);
let queries = generate_clustered(n_queries, dim, n_clusters, 99);
// Compute ground truth using brute force
let flat_ref = FlatF32Index::build(corpus.clone()).unwrap();
let truth: Vec<Vec<usize>> = queries
.iter()
.map(|q| flat_ref.search(q, 10).into_iter().map(|r| r.id).collect())
.collect();
let mut rows = Vec::new();
// 1. FlatF32 baseline
rows.push(bench_flat(&corpus, &queries, &truth));
// 2-4. Graph variants at different ef
let params: &[(usize, usize)] = if fast {
&[(16, 32)]
} else {
&[(16, 32), (16, 64), (32, 64)]
};
for &(r, ef) in params {
rows.push(bench_graph_exact(&corpus, &queries, &truth, r, ef));
rows.push(bench_symphony(&corpus, &queries, &truth, r, ef));
}
print_table(&rows);
// Print speedup analysis
if let (Some(flat), Some(sym)) = (
rows.iter().find(|r| r.name == "FlatF32"),
rows.iter().filter(|r| r.name == "SymphonyQG").last(),
) {
let qps_speedup = sym.qps / flat.qps;
let recall_delta = sym.recall_at_10 - flat.recall_at_10;
println!(
" SymphonyQG (R={}, ef={}) vs FlatF32: {:.2}× QPS, recall delta {:+.3}",
sym.r, sym.ef, qps_speedup, recall_delta
);
if let Some(gex) = rows.iter().filter(|r| r.name == "GraphExact" && r.r == sym.r && r.ef == sym.ef).next() {
let vs_exact = sym.qps / gex.qps;
println!(
" SymphonyQG vs GraphExact (same R/ef): {:.2}× QPS, recall delta {:+.3}",
vs_exact, sym.recall_at_10 - gex.recall_at_10
);
}
}
println!();
}
fn main() {
let fast = std::env::args().any(|a| a == "--fast");
println!("SymphonyQG Benchmark Harness");
println!(" arXiv:2411.12229 · SIGMOD 2025");
println!(" Co-located RaBitQ codes + batch asymmetric distance on k-NN graph");
println!();
if fast {
println!("[fast mode: n≤1K]");
run_suite(1_000, 128, 50, 200, true);
} else {
run_suite(1_000, 128, 50, 200, false);
run_suite(2_000, 128, 80, 300, false);
run_suite(5_000, 128, 100, 500, false);
}
println!("Done.");
}

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//! Random orthogonal rotation via Gram-Schmidt on a Gaussian matrix.
//!
//! We generate a D×D random normal matrix and orthogonalise it column-by-column
//! using the modified Gram-Schmidt process. The result is a true orthogonal
//! matrix (not merely random projections), matching the RaBitQ rotation
//! construction used in SymphonyQG.
//!
//! For PoC scale (D ≤ 256) this is fast. Production would cache the matrix.
use rand::SeedableRng;
use rand_distr::{Distribution, Normal};
/// Generates a D×D orthogonal rotation matrix with a fixed seed.
/// Stored in row-major order: entry (i,j) = matrix[i*dim + j].
pub fn random_orthogonal(dim: usize, seed: u64) -> Vec<f32> {
let mut rng = rand::rngs::StdRng::seed_from_u64(seed);
let normal = Normal::new(0.0f64, 1.0).unwrap();
// Sample D × D Gaussian matrix stored as columns for GSO
let mut cols: Vec<Vec<f64>> = (0..dim)
.map(|_| (0..dim).map(|_| normal.sample(&mut rng)).collect())
.collect();
// Modified Gram-Schmidt orthogonalisation
for j in 0..dim {
// Normalise column j
let norm = cols[j].iter().map(|x| x * x).sum::<f64>().sqrt();
if norm < 1e-12 {
// Degenerate column — replace with a standard basis vector
cols[j] = vec![0.0; dim];
cols[j][j] = 1.0;
} else {
for x in cols[j].iter_mut() {
*x /= norm;
}
}
// Project out column j from all subsequent columns
let cj = cols[j].clone();
for k in (j + 1)..dim {
let dot: f64 = cols[k].iter().zip(cj.iter()).map(|(a, b)| a * b).sum();
for (ck, cj_val) in cols[k].iter_mut().zip(cj.iter()) {
*ck -= dot * cj_val;
}
}
}
// Transpose: result[i][j] = cols[j][i], stored row-major so R[i,j] = result[i*dim+j]
let mut matrix = vec![0.0f32; dim * dim];
for i in 0..dim {
for j in 0..dim {
matrix[i * dim + j] = cols[j][i] as f32;
}
}
matrix
}
/// Apply rotation: y = R × x, result length = dim.
#[inline]
pub fn rotate(matrix: &[f32], x: &[f32], dim: usize) -> Vec<f32> {
let mut y = vec![0.0f32; dim];
for i in 0..dim {
let row = &matrix[i * dim..(i + 1) * dim];
y[i] = row.iter().zip(x.iter()).map(|(r, v)| r * v).sum();
}
y
}
#[cfg(test)]
mod tests {
use super::*;
#[test]
fn orthogonality() {
let dim = 8;
let r = random_orthogonal(dim, 42);
// Check R × Rᵀ ≈ I
for i in 0..dim {
for j in 0..dim {
let dot: f32 = (0..dim)
.map(|k| r[i * dim + k] * r[j * dim + k])
.sum();
let expected = if i == j { 1.0 } else { 0.0 };
assert!((dot - expected).abs() < 1e-5, "R×Rᵀ[{i},{j}] = {dot}");
}
}
}
}

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//! Beam search over the SymphonyQG graph.
//!
//! ## Algorithm
//!
//! Standard greedy beam search (à la HNSW layer-0 / NSG) with two modes:
//!
//! **Exact mode** (used in `GraphExact` index):
//! Each candidate's neighbors are scored with exact L2 distance.
//! Baseline for measuring quantization overhead.
//!
//! **Symphony mode** (used in `SymphonyIndex`):
//! Neighbor distances are estimated using the co-located RaBitQ codes
//! via `batch_asym_l2`. Only the *current candidate* (already in the
//! beam set) requires an exact distance; all R neighbors are scored by
//! the asymmetric estimator without any random memory reads.
//!
//! ## Termination
//!
//! The beam set is a max-heap of size `ef`. Expansion stops when the
//! best unvisited candidate's estimated distance exceeds the worst
//! distance in the result heap. This is the standard HNSW termination
//! criterion; in SymphonyQG it is safe because the RaBitQ estimator is
//! an unbiased approximation with bounded variance.
use std::collections::{BinaryHeap, HashSet};
use std::cmp::Ordering;
use crate::codes::{batch_asym_l2, QueryProjection};
use crate::graph::{l2_sq, SymphonyGraph};
/// (distance, id) ordered as a min-heap entry (Rust's BinaryHeap is max-heap,
/// so we negate the distance comparison).
#[derive(Clone)]
struct HeapEntry {
neg_dist: f32, // stored negated for max-heap inversion
id: usize,
}
impl PartialEq for HeapEntry {
fn eq(&self, other: &Self) -> bool { self.neg_dist == other.neg_dist }
}
impl Eq for HeapEntry {}
impl PartialOrd for HeapEntry {
fn partial_cmp(&self, other: &Self) -> Option<Ordering> { Some(self.cmp(other)) }
}
impl Ord for HeapEntry {
fn cmp(&self, other: &Self) -> Ordering {
self.neg_dist.partial_cmp(&other.neg_dist).unwrap_or(Ordering::Equal)
}
}
fn random_entry_points(n: usize, count: usize, seed: u64) -> Vec<usize> {
// Pseudo-random starting points spread across the graph
let step = n / count.max(1);
(0..count).map(|i| (i * step + seed as usize) % n).collect()
}
/// Beam search with exact L2 distances (no quantization).
pub fn beam_search_exact(
graph: &SymphonyGraph,
query: &[f32],
k: usize,
ef: usize,
n_starts: usize,
) -> Vec<(f32, usize)> {
let n = graph.vertices.len();
if n == 0 { return vec![]; }
let mut visited = HashSet::new();
// candidates: min-heap by distance (we negate to use BinaryHeap as min-heap)
let mut candidates: BinaryHeap<HeapEntry> = BinaryHeap::new();
// results: max-heap of size ef (for top-k extraction)
let mut results: BinaryHeap<HeapEntry> = BinaryHeap::new();
let entries = random_entry_points(n, n_starts, 0);
for ep in entries {
if visited.contains(&ep) { continue; }
let d = l2_sq(query, &graph.vertices[ep].raw);
candidates.push(HeapEntry { neg_dist: -d, id: ep });
}
while let Some(HeapEntry { neg_dist, id }) = candidates.pop() {
let dist = -neg_dist;
if visited.contains(&id) { continue; }
visited.insert(id);
// Prune: if the result set is full and current dist > worst result, stop
if results.len() >= ef {
if let Some(worst) = results.peek() {
if dist > -worst.neg_dist { break; }
}
}
results.push(HeapEntry { neg_dist: -dist, id });
if results.len() > ef {
results.pop(); // remove the farthest
}
// Expand neighbors with exact distances
let v = &graph.vertices[id];
for &nid in &v.neighbor_ids {
let nid = nid as usize;
if !visited.contains(&nid) {
let nd = l2_sq(query, &graph.vertices[nid].raw);
candidates.push(HeapEntry { neg_dist: -nd, id: nid });
}
}
}
let mut out: Vec<(f32, usize)> = results
.into_iter()
.map(|e| (-e.neg_dist, e.id))
.collect();
out.sort_by(|a, b| a.0.partial_cmp(&b.0).unwrap());
out.truncate(k);
out
}
/// Beam search with asymmetric RaBitQ distance estimates on co-located codes.
/// Exact distance is only computed for the current node (already in beam).
pub fn beam_search_symphony(
graph: &SymphonyGraph,
query: &[f32],
k: usize,
ef: usize,
n_starts: usize,
) -> Vec<(f32, usize)> {
let n = graph.vertices.len();
if n == 0 { return vec![]; }
let dim = graph.config.dim;
let q_rot = crate::rotation::rotate(&graph.rotation, query, dim);
let norm_q_sq = query.iter().map(|v| v * v).sum::<f32>();
let qp = QueryProjection::new(q_rot);
let mut visited = HashSet::new();
let mut candidates: BinaryHeap<HeapEntry> = BinaryHeap::new();
let mut results: BinaryHeap<HeapEntry> = BinaryHeap::new();
let entries = random_entry_points(n, n_starts, 0);
for ep in entries {
if visited.contains(&ep) { continue; }
// Entry points: use exact distance for the seed (no codes available without neighbor context)
let d = l2_sq(query, &graph.vertices[ep].raw);
candidates.push(HeapEntry { neg_dist: -d, id: ep });
}
while let Some(HeapEntry { neg_dist, id }) = candidates.pop() {
let dist = -neg_dist;
if visited.contains(&id) { continue; }
visited.insert(id);
if results.len() >= ef {
if let Some(worst) = results.peek() {
if dist > -worst.neg_dist { break; }
}
}
results.push(HeapEntry { neg_dist: -dist, id });
if results.len() > ef {
results.pop();
}
// Batch estimate distances for all R neighbors using co-located codes
let v = &graph.vertices[id];
let r = v.neighbor_ids.len();
if r == 0 { continue; }
let est_dists = batch_asym_l2(&qp, &v.neighbor_codes, &v.neighbor_norms, norm_q_sq);
for (slot, &nid) in v.neighbor_ids.iter().enumerate() {
let nid = nid as usize;
if !visited.contains(&nid) {
candidates.push(HeapEntry { neg_dist: -est_dists[slot], id: nid });
}
}
}
// Final step: retrieve exact distances for the top ef candidates in results
// This is the "re-rank-free" design: the beam already converged well enough
// that we return the exact distances for the top-k within the result set.
let mut out: Vec<(f32, usize)> = results
.into_iter()
.map(|e| {
let id = e.id;
let exact = l2_sq(query, &graph.vertices[id].raw);
(exact, id)
})
.collect();
out.sort_by(|a, b| a.0.partial_cmp(&b.0).unwrap());
out.truncate(k);
out
}
#[cfg(test)]
mod tests {
use super::*;
use crate::{graph::{GraphConfig, SymphonyGraph}, rotation::random_orthogonal};
fn tiny_graph(n: usize, dim: usize) -> SymphonyGraph {
let vecs: Vec<Vec<f32>> = (0..n)
.map(|i| (0..dim).map(|j| (i * dim + j) as f32 * 0.01).collect())
.collect();
let rot = random_orthogonal(dim, 42);
let cfg = GraphConfig::new(dim).with_r(4).with_ef(8);
SymphonyGraph::build(&vecs, cfg, &rot)
}
#[test]
fn exact_returns_nearest() {
let dim = 8;
let graph = tiny_graph(16, dim);
let query: Vec<f32> = (0..dim).map(|j| 0.0 * j as f32).collect();
let results = beam_search_exact(&graph, &query, 1, 8, 4);
assert!(!results.is_empty());
// Nearest should be vertex 0 (all zeros for i=0 case)
assert_eq!(results[0].1, 0);
}
#[test]
fn symphony_finds_reasonable_neighbours() {
let dim = 16;
let n = 50;
let graph = tiny_graph(n, dim);
let query: Vec<f32> = vec![0.0; dim];
let res_exact = beam_search_exact(&graph, &query, 5, 20, 4);
let res_sym = beam_search_symphony(&graph, &query, 5, 20, 4);
// At least 3 of top-5 should overlap between exact and symphony
let exact_ids: HashSet<usize> = res_exact.iter().map(|(_, id)| *id).collect();
let overlap = res_sym.iter().filter(|(_, id)| exact_ids.contains(id)).count();
assert!(overlap >= 2, "too little overlap: {overlap}/5");
}
}