* fix(doctor): preserve allowlist entries for version-bound runtime plugins (codex) during stale config scan
* fix(doctor): restore codex to scanner stale expectation, protect at repair-sequencing
Scanner now flags codex in plugins.allow as stale so diagnostics are visible.
Repair-sequencing preserves the entry via preservePluginIds which already
includes VERSION_BOUND_RUNTIME_PLUGIN_IDS.
* fix(doctor): scope version-bound runtime plugin preservation to allow surface only
ClawSweeper P2: VERSION_BOUND_RUNTIME_PLUGIN_IDS was applied globally
across all stale config surfaces (deny, entries, slots, channels, etc.),
but only plugins.allow needs preservation. Move to a surface-scoped
parameter surfacePreservePluginIds so codex is preserved only in allow.
* fix(doctor): harden version-bound allowlist repair
* fix(doctor): retain version-bound plugin policy
* fix(doctor): align version-bound plugin diagnostics
Co-authored-by: hailory <hailory@xydigit.com>
---------
Co-authored-by: hailory <hailory@xydigit.com>
Co-authored-by: Peter Steinberger <steipete@gmail.com>
