feat(file_utils): robust path handling and safe directory listing (#1195)

Co-authored-by: Cursor <cursoragent@cursor.com>
Co-authored-by: bytecii <bytecii@users.noreply.github.com>

.github/workflows/codeql.yml

@@ -73,12 +73,7 @@ jobs:
       with:
         languages: ${{ matrix.language }}
         build-mode: ${{ matrix.build-mode }}
-        config: |
-          paths-ignore:
-            # Third-party packages (vendored from external sources)
-            - 'package/@stackframe/**'
-            - 'node_modules/**'
-            - '**/node_modules/**'
+        config-file: ./.github/codeql/codeql-config.yml
         # If you wish to specify custom queries, you can do so here or in a config file.
         # By default, queries listed here will override any specified in a config file.
         # Prefix the list here with "+" to use these queries and those in the config file.