deer-flow/backend/tests/test_persistence_bootstrap_url.py
AnoobFeng debb0fd161
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feat(persistence): wire alembic migrations, bootstrap schema on startup (#3706)
* feat(persistence): wire alembic migrations + bootstrap schema on startup

Closes #3682. Pre-#3658 DBs lack the `runs.token_usage_by_model` column
because alembic was never wired up — startup only ran `create_all`,
which never ALTERs existing tables.

Adds a hybrid bootstrap in FastAPI lifespan (replaces bare `create_all`):
- empty DB     → create_all + stamp head
- legacy DB    → stamp 0001_baseline + upgrade head
- versioned DB → upgrade head

Concurrency: Postgres `pg_advisory_lock` (cross-process); SQLite
per-engine `asyncio.Lock` + 30s `PRAGMA busy_timeout` on both prod and
alembic engines. Column revisions use `safe_add_column` /
`safe_drop_column` idempotent helpers as fallback.

Other bits:
- 0001 baseline (chain root) + 0002 add `runs.token_usage_by_model`
- `include_object` filter so alembic ignores LangGraph checkpointer tables
- `make migrate-rev MSG="..."` for authoring new revisions
  (no migrate/stamp targets — startup is the only execution path)
- Tests: three-branch decision, concurrency, #3682 regression, env
  filter, blocking-IO gate anchor
- CLAUDE.md: new "Schema migrations" section

* fix(style): fix lint error

* perf(persistence): address review feedback on alembic bootstrap

Behavioural fixes
- _SQLITE_LOCKS now keyed via WeakKeyDictionary so id-reuse after GC
  cannot return a stale, loop-bound lock and the cache cannot leak one
  entry per disposed engine.
- safe_add_column compares nullable / server_default against the desired
  column when the name already exists and emits a warning on drift,
  surfacing manual-ALTER workarounds instead of silently no-op'ing.
- _postgres_lock issues SET LOCAL idle_in_transaction_session_timeout=0
  before pg_advisory_lock, so managed Postgres cannot kill the idle
  lock-holding session mid-upgrade and silently release the advisory
  lock.
- legacy branch now backfills missing baseline tables via a restricted
  create_all (Base.metadata.create_all scoped to _BASELINE_TABLE_NAMES).
  Restores pre-#1930 upgraders whose channel_* tables were never
  provisioned, without pre-empting future create_table revisions for
  newly-added models.

Schema parity
- runs.token_usage_by_model gains server_default=text("'{}'") in both
  the ORM model and the 0001_baseline create_table, matching what 0002
  adds via ALTER. create_all and alembic-upgrade paths now produce
  identical column definitions.
- New parity test compares Base.metadata.create_all output against a
  pure alembic upgrade base->head, asserting column-set, nullable, and
  server_default agree across all tables (normalized through the same
  helper safe_add_column's drift check uses).

Guards
- test_baseline_table_names_constant_matches_0001 pins
  _BASELINE_TABLE_NAMES to 0001_baseline.upgrade()'s actual output --
  the constant cannot drift silently when someone edits 0001.
- test_legacy_backfill_skips_non_baseline_tables verifies the restricted
  backfill does not create a phantom table on Base.metadata, modelling
  a future revision that would otherwise collide on op.create_table.

Doc residuals
- Three-branch decision table is now consistent across bootstrap.py
  top docstring, engine.py comment, test module docstring, and
  CLAUDE.md.
- Stale test anchor in blocking_io/test_persistence_engine_sqlite.py
  docstring now points at the real file.

* fix(style): fix lint error

* fix(persistence): close drift detection holes

- _check_column_drift compares column type via a family equivalence
  allowlist ({JSON, JSONB}). Catches the wrong-type workaround
  `TEXT NOT NULL DEFAULT '{}'` that previously slipped through silently,
  while keeping Postgres JSON/JSONB dialect reflection quiet. Reflected
  and desired type are also echoed in every drift warning's payload for
  operator triage.

- Extract _escape_url_for_alembic so bootstrap._alembic_safe_url and
  scripts/_autogen_revision share the ConfigParser % escape rule
  instead of duplicating it.

- backend/README.md: add `make migrate-rev MSG=...` to Commands and a
  Schema Migrations section per the repo's README/CLAUDE.md sync policy.

- test_base_to_dict.py: scope the test ORM class to an isolated MetaData
  so the create_all-vs-alembic parity test (added in the previous
  commit) is not polluted by the phantom table on the full pytest
  session.
2026-06-24 13:57:12 +08:00

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3.3 KiB
Python

"""Tests for the Postgres URL / ConfigParser pitfalls in ``bootstrap``.
Two failure modes the ``_alembic_safe_url`` helper exists to prevent:
1. ``str(engine.url)`` (and the default ``URL.render_as_string()``) masks the
password as ``***``. The live engine would still work because it carries
the password in-memory, but alembic ``stamp`` / ``upgrade`` (which open
their own connection from the URL we pass in) would authenticate with
garbage and fail at runtime.
2. ``alembic.config.Config.set_main_option`` forwards to ``ConfigParser.set``,
which performs ``%(name)s``-style interpolation on the value. A URL-encoded
password containing ``%`` (e.g. ``p%40ss`` for ``p@ss``) raises
``InterpolationSyntaxError``. Every literal ``%`` must be doubled.
"""
from __future__ import annotations
from types import SimpleNamespace
from sqlalchemy.engine.url import make_url
from deerflow.persistence.bootstrap import _alembic_safe_url, _escape_url_for_alembic, _get_alembic_config
def _fake_engine(url: str) -> SimpleNamespace:
"""Build a minimal stand-in for ``AsyncEngine`` so we don't need a real
driver (e.g. asyncpg) installed just to exercise the URL path."""
return SimpleNamespace(url=make_url(url))
def test_safe_url_preserves_password_for_postgres() -> None:
engine = _fake_engine("postgresql://alice:s3cret@db.example.com/app")
safe = _alembic_safe_url(engine)
assert "s3cret" in safe, "password got masked: alembic would auth with garbage"
assert "***" not in safe
def test_safe_url_escapes_percent_for_configparser() -> None:
# URL-encoded ``@`` in password -> raw ``%40`` in URL -> ConfigParser
# would treat it as an interpolation marker.
engine = _fake_engine("postgresql://alice:p%40ss@db.example.com/app")
safe = _alembic_safe_url(engine)
assert "p%%40ss" in safe, f"percent not doubled, ConfigParser will fail: {safe}"
def test_alembic_config_accepts_url_with_percent_and_round_trips() -> None:
# The whole point: build_config should not raise, and the URL alembic
# reads back should match the original (single ``%``, real password).
original = "postgresql://alice:p%40ss@db.example.com/app"
engine = _fake_engine(original)
cfg = _get_alembic_config(engine)
roundtrip = cfg.get_main_option("sqlalchemy.url")
assert roundtrip == original, f"alembic sees a different URL than we set: {roundtrip}"
def test_sqlite_url_does_not_double_percent_unnecessarily() -> None:
# No percent in the URL -> no escaping needed -> output equals input.
engine = _fake_engine("sqlite+aiosqlite:///tmp/db.sqlite")
safe = _alembic_safe_url(engine)
assert safe == "sqlite+aiosqlite:///tmp/db.sqlite"
def test_escape_url_for_alembic_doubles_only_percent_signs() -> None:
# Shared helper used by both ``bootstrap._alembic_safe_url`` and
# ``scripts/_autogen_revision._alembic_config`` -- pins the round-trip
# rule so any future URL/ConfigParser corner case is fixed in one place.
assert _escape_url_for_alembic("postgresql://a:p%40ss@h/d") == "postgresql://a:p%%40ss@h/d"
assert _escape_url_for_alembic("sqlite:///x.db") == "sqlite:///x.db"
# Idempotency is intentionally NOT a property -- doubling is one-way;
# callers must escape exactly once on the way into set_main_option.
assert _escape_url_for_alembic("a%%b") == "a%%%%b"