Clear DeferredTask callables and arguments after completion or cancellation while running each invocation from a safe private snapshot. Preserve result retrieval and active restart behavior, clean up child tasks, and add best-effort local and SSH session destructors with focused lifecycle regression coverage.
Detect and treat terminated local/SSH/TTY shells as definitive command completion. Add is_terminated and get_exit_code helpers to LocalInteractiveSession, SSHInteractiveSession, and TTYSession; expand _is_closed_pty_error to recognize exited TTY processes. CodeExecution now reports a shell-exit prompt, recreates terminated sessions lazily before the next command, and returns immediately when a shell has exited. Docs and README updated to describe strict-mode/exit behavior, and tests were added/updated to cover the new termination detection and handling.
Execute multiline terminal input as one current-shell compound so intermediate prompts cannot complete queued work early. Preserve shell state and cover Bash and PowerShell grouping with regression tests.
Start local PTY shells in a new process session and make close() escalate from SIGTERM to SIGKILL when a foreground command refuses to exit. This keeps code_execution_tool reset from blocking indefinitely on stuck terminal processes.\n\nAdd regression coverage for closing a TERM-resistant shell and document the reset lifecycle contract.
Add comprehensive file-level DOX documentation across the repo and update directory AGENTS.md indexes. Many new `*.py.dox.md` files were added under api, helpers, tools, plugins, extensions, webui, and other dirs to document endpoint purpose, ownership, runtime contracts, work guidance, and verification. Several AGENTS.md files were created or updated (agents profiles, api, docker, extensions, helpers, plugins, skills, webui components, etc.) to list child DOX files and clarify documentation/work guidance. Also add example and bundled profile DOX files (agent0, default, developer, hacker, researcher) and minor updates to helpers/dirty_json.py and its tests. These changes improve on-disk documentation coverage and establish the convention that each direct runtime file should have a matching `*.dox.md` describing its contracts and verification steps.
